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Description : Check out this medical PowerPoint presentation titled "Optical mineralogy” by Meral Dogan.

This medical PowerPoint presentation is about optical mineralogy, a branch of mineralogy that involves the study of minerals through their interaction with light. It focuses on the properties of minerals that can be observed with the use of a polarizing microscope and the interpretation of these properties in terms of mineral identification and characterization.

The study of optical mineralogy involves the use of thin sections, which are thin slices of rocks or minerals that are mounted on a glass slide and viewed under polarized light. The use of polarized light allows for the observation of various optical properties of minerals, such as birefringence, pleochroism, and extinction.

Birefringence is the property of a mineral to split a beam of light into two rays that travel at different speeds, resulting in the interference of the two rays and the production of interference colors. Pleochroism is the property of a mineral to absorb light differently in different crystallographic directions, resulting in a change in color when viewed from different angles. Extinction refers to the behavior of a mineral under polarized light when it goes from being visible to disappearing or "extinct" due to the orientation of its crystal structure relative to the polarizer and analyzer.

By studying the optical properties of minerals, geologists and mineralogists can identify and characterize minerals in various geological materials, such as rocks, sediments, and ores. Optical mineralogy is an important tool in the fields of geology, mineralogy, and petrology, and is used in a wide range of applications, including mineral exploration, environmental monitoring, and forensic analysis.

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Slide 1-

OPTICAL MINERALOGY Geology 265– Mineraloji Meral Dogan Lecture : optik mineraloji Dr. Dogan’s homepage
Slide 2-

Optik mikroskop-petrografik mikroskop-polarizan mikroskop
Slide 3-

Petrographic microscope
Slide 4-

Two complimentary theories have been proposed to explain how light behaves and the form by which it travels Particle theory - release of a small amount of energy as a photon when an atom is excited. Wave theory - radiant energy travels as a wave from one point to another. Waves have electrical and magnetic properties => electromagnetic variations. Wave theory effectively describes the phenomena of polarization, reflection, refraction and interference, which form the basis for optical mineralogy
Slide 5-

The electromagnetic radiation theory of light implies that light consists of electric and magnetic components which vibrate at right angles to the direction of propagation. In optical mineralogy only the electric component, referred to as the electric vector, is considered and is referred to as the vibration direction of the light ray. The vibration direction of the electric vector is perpendicular to the direction in which the light is propagating. The behaviour of light within minerals results from the interaction of the electric vector of the light ray with the electric character of the mineral, which is a reflection of the atoms and the chemical bonds within that minerals. Light waves are described in terms of velocity, frequency and wavelength. ELECTROMAGNETIC RADIATION
Slide 6-

WAVE NOMENCLATURE
Slide 7-

REFLECTION AND REFRACTION At the interface between the two materials, e.g. air and water, light may be reflected at the interface or refracted (bent) into the new medium. For Reflection the angle of incidence = angle of reflection .
Slide 8-

For Refraction the light is bent when passing from one material to another, at an angle other than perpendicular. A measure of how effective a material is in bending light is called the Index of Refraction (n), where:
Slide 9-

. Light emanating from some source, sun, or a light bulb, vibrates in all directions at right angles to the direction of propagation and is unpolarized. In optical mineralogy we need to produce light which vibrates in a single direction and we need to know the vibration direction of the light ray. These two requirements can be easily met but polarizing the light coming from the light source, by means of a polarizing filter. POLARIZATION OF LIGHT
Slide 10-

completely polarized light Unpolarized light strikes a smooth surface, such as a pane of glass, tabletop, and the reflected light is polarized such that its vibration direction is parallel to the reflecting surface. The reflected light is completely polarized only when the angle between the reflected and the refracted ray = 90°.
Slide 11-

Index of Refraction in Vacuum = 1 and for all other materials n > 1.0. Most minerals have n values in the range 1.4 to 2.0. A high Refractive Index indicates a low velocity for light travelling through that particular medium.
Slide 12-

Snell's law can be used to calculate how much the light will bend on travelling into the new medium. If the interface between the two materials represents the boundary between air (n ~ 1) and water (n = 1.33) and if angle of incidence = 45°, using Snell's Law the angle of refraction = 32°. The equation holds whether light travels from air to water, or water to air. In general, the light is refracted towards the normal to the boundary on entering the material with a higher refractive index and is refracted away from the normal on entering the material with lower refractive index. In labs, you will be examining refraction and actually determine the refractive index of various materials.
Slide 13-

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Slide 14-

Three types of polarization are possible. 1-Plane Polarization 2-Circular Polarization 3-Elliptical Polarization
Slide 15-

In the petrographic microscope In the petrographic microscope plane polarized light is used. For plane polarized light the electric vector of the light ray is allowed to vibrate in a single plane,producing a simple sine wave with a vibration direction lying in the plane of polarization - this is termed plane light or plane polarized light. Plane polarized light may be produced by reflection, selective absorption, double refraction scattering.
Slide 16-

Double Refraction This method of producing plane polarized light was employed prior to selective absorption in microscopes. The most common method used was the Nicole Prism. .
Slide 17-

Some anisotropic material s have the ability to strongly absorb light vibrating in one direction and transmitting light vibrating at right angles more easily. The ability to selectively transmit and absorb light is termed pleochroism, seen in minerals such as tourmaline, biotite, hornblende, (most amphiboles), some pyroxenes. Upon entering an anisotropic material, unpolarized light is split into two plane polarized rays whose vibratioin directions are perpendicular to each other, with each ray having about half the total light energy. If anisotropic material is thick enough and strongly pleochroic, one ray is completely absorbed, the other ray passes through the material to emerge and retain its polarization. This method is used to produce plane polarized light in microscopes, using polarized filters.
Slide 18-

PHASE AND INTERFERENCE Before going on to examine how light inteacts with minerals we must define one term: RETARDATION - ∆ (delta) represents the distance that one ray lags behind another. Retardation is measured in nanometres, 1nm = 10-7cm, or the number of wavelengths by which a wave lags behind another light wave.The relationship between rays travelling along the same path and the interference between the rays is illustrated in the following three figures.
Slide 19-

If retardation is a whole number (i.e., 0, 1, 2, 3, etc.) of wavelengths.The two waves, A and B, are IN PHASE, and they constructively interfere with each other. The resultant wave (R) is the sum of wave A and B.
Slide 20-

. When retardation is = ½, 1½, 2½ . . . wavelengths.The two waves are OUT OF PHASE they destructively interfere, cancelling each other out, producing the resultant wave (R), which has no amplitude or wavelength
Slide 21-

If the retardation is an intermediate value, the the two waves will: be partially in phase, with the interference being partially constructive and be partially out of phase, partially destructive
Slide 22-

If a mineral is placed at 45° to the vibration directions of the polarizers the mineral yields its brightest illumination and percent transmission (T).
Slide 23-

MONOCHROMATIC LIGHT
Slide 24-

Dark areas where retardation is a whole number of wavelengths. light areas where the two rays are out of phase,
Slide 25-

Retardation development
Slide 26-

RETARDATION Monochromatic ray, of plane polarized light, upon entering an anisotropic mineral is split into two rays, the FAST and SLOW rays, which vibrate at right angles to each other.
Slide 27-

The birefringence for a mineral in a thin section can also be determined using the equation for retardation, which relates thickness and birefringence. Retardation can be determined by examining the interference colour for the mineral and recording the wavelength of the retardation corresponding to that colour by reading it directly off the bottom of Plate I. The thickness of the thin section is ~ 30 µm. With this the birefringence for the mineral can be determined, using the equation:
Slide 28-

Due to differences in velocity the slow ray lags behind the fast ray, and the distance represented by this lagging after both rays have exited the crystal is the retardation -∆. The magnitude of the retardation is dependant on the thickness (d) of the mineral and the differences in the velocity of the slow (Vs) and fast (Vf) rays. The time it takes the slow ray to pass through the mineral is given by the formula above (∆=d(nslow-nfast) during this same interval of time the fast ray has already passed through the mineral and has travelled an additional distance = retardation.
Slide 29-

Minerals can be subdivided, based on the interaction of the light ray travelling through the mineral and the nature of the chemical bonds holding the mineral together, into two classes: 1-Isotropic minerals (izometric minerals) 2-Anisotropic minerals (rest of the crystal system minerals)
Slide 30-

In isotropic materials the Wave Normal and Light Ray are parallel. In anisotropic minerals the Wave Normal and Light Ray are not parallel. Light waves travelling along the same path in the same plane will interfere with each other.
Slide 31-

1-Isotropic Minerals Isotropic materials show the same velocity of light in all directions because the chemical bonds holding the minerals together are the same in all directions, so light travels at the same velocity in all directions. Examples: isometric minerals (cubic):Fluorite, Garnet, Halite Determine the refraction index: Use becke line, relief a-compare the mineral with n of Canadian balsam, or b-compare the known mineral next to it), or c-use oil with known refraction index to compare Reliyef (optik engebe), becke çizgisi, kırılma indisi (RI) determinasyonu
Slide 32-

Optical microskope 1-Opaque (opak) minerals 2-Isotropic (izotropik) minerals 3-Anisotropic (anizotropik) minerals If amourphous-mineraloid, coal example
Slide 33-

Anisotropic minerals differ from isotropic minerals because: the velocity of light varies depending on direction through the mineral; they show double refraction. When light enters an anisotropic mineral it is split into two rays of different velocity which vibrate at right angles to each other. In anisotropic minerals there are one or two directions, through the mineral,along which light behaves as though the mineral were isotropic. This direction (tetragonal and orthorombic systems) or these directions (hexagonal, monoclinic and triclinic systems) are referred to as the optic axis (or optic axes).
Slide 34-

Optix axis (axes) Hexagonal and tetragonal minerals have one optic axis and are optically UNIAXIAL. Orthorhombic, monoclinic and triclinic minerals have two optic axes and are optically BIAXIAL. In Lab, you will examine double refraction in anisotropic minerals, using calcite rhombs.
Slide 35-

Anisotropic Minerals Anisotropic minerals have a different velocity for light, depending on the direction the light is travelling through the mineral. The chemical bonds holding the mineral together will differ depending on the direction the light ray travels through the mineral. Anisotropic minerals belong to tetragonal, hexagonal, orthorhombic, monoclinic and triclinic systems. A-Tek optik eksenli minerallerin optik özelliği (Uniaxal optics): Uniaxial indicatrics, interference figures, optic sign determination Tek optik eksenli mineraller: tetragonal, hexagonal qtz, apatit, nefelin, kalsit, zirkon B-Çift optik eksenli minerallerin optik özellikleri (Biaxial optics): Biaxial indicatrics, interference figures, optic sign determination Çift optik eksenli mineraller: orthorhombic, monoclinic and triclinic olivin, piroksen, amfiboller, mikalar, plajiyoklas, alkali feldspatlar
Slide 36-

ATOMIC PACKING As was discussed in the previous section we can use the electromagnetic theory for light to explain how a light ray is split into two rays (FAST and SLOW) which vibrate at right angles to each other. Also see the figure from the black board (calcite Crystal)
Slide 37-

With a random wavefront the strength of the electric field, generated by the mineral, must have a minimum in one direction and a maximum at right angles (90 degrees) to that. Result is that the electronic field strengths within the plane of the wavefront define a n ellipse whose axes are; at 90° to each other, represent maximum and minimum field strengths, and correspond to the vibration directions of the two resulting rays. The two rays encounter different electric configurations therefore their velocities and indices of refraction must be different.
Slide 38-

CONTİNUE There will always be one or two planes through any anisotropic material which show uniform electron configurations, resulting in the electric field strengths plotting as a circle rather than an ellipse. Lines at right angles to this plane or planes are the optic axis (axes) representing the direction through the mineral along which light propagates without being split, i.e., the anisotropic mineral behaves as if it were an isotropic mineral.
Slide 39-

Ordinary and extraordinary ray Light travelling through the calcite rhomb is split into two rays which vibrate at right angles to each other. The two rays and the corresponding images produced by the two rays are apparent in the above image. The two rays are: Ordinary Ray, labelled omega w, nw = 1.658 Extraordinary Ray, labelled epsilon e, ne = 1.486.
Slide 40-

Vibration Directions of the Two Rays The vibration directions for the ordinary and extraordinary rays, the two rays which exit the calcite rhomb, can be determined using a piece of polarized film. The polarized film has a single vibration direction and as such only allows light, which has the same vibration direction as the filter, to pass through the filter to be detected by your eye.
Slide 41-

Vibration direction
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ppt slide no 42 content not found
Slide 43-

Light ray With the polaroid filter in this orientation only one row of dots is visible within the area of the calcite rhomb covered by the filter. This row of dots corresponds to the light ray which has a vibration direction parallel to the filter's preferred or permitted vibration direction and as such it passes through the filter. The other light ray represented by the other row of dots, clearly visible on the left, in the calcite rhomb is completely absorbed by the filter.
Slide 44-

Slow and fast ray With the polaroid filter in this orientation again only one row of dots is visible, within the area of the calcite coverd by the filter. This is the other row of dots thatn that observed in the previous image. The light corresponding to this row has a vibration direction parallel to the filter's preferred vibration direction. It is possible to measure the index of refraction for the two rays using the immersion oils, and one index will be higher than the other. The ray with the lower index is called the fast ray recall that n = Vvac/VmediumIf nFast Ray = 1.486, then VFast Ray = 2.02X1010 m/sec The ray with the higher index is the slow ray If nSlow Ray = 1.658, then VSlow Ray = 1.8 1x1010 m/sec
Slide 45-

Remember the difference between: vibration direction - side to side oscillation of the electric vector of the plane light and propagation direction - the direction light is travelling. Electromagnetic theory can be used to explain why light velocity varies with the direction it travels through an anisotropic mineral. Strength of chemical bonds and atom density are different in different directions for anisotropic minerals. A light ray will "see" a different electronic arrangement depending on the direction it takes through the mineral. The electron clouds around each atom vibrate with different resonant frequencies in different directions.
Slide 46-

Velocity of light Velocity of light travelling though an anisotropic mineral is dependant on the interaction between the vibration direction of the electric vector of the light and the resonant frequency of the electron clouds. Resulting in the variation in velocity with direction. Can also use electromagnetic theory to explain why light entering an anisotropic mineral is split into two rays (fast and slow rays) which vibrate at right angles to each other.
Slide 47-

INTERFERENCE PHENOMENA The colours for an anisotropic mineral observed in thin section, between crossed polars are called interference colours and are produced as a consequence of splitting the light into two rays on passing through the mineral. In the labs we will examine interference phenomena first using monochromatic light and then apply the concepts to polychromatic or white light.
Slide 48-

The relationship (ns - nf) is called birefringence (defined by double refraction), given Greek symbol lower case d (delta), represents the difference in the indices of refraction for the slow and fast rays. In anisotropic minerals one path, along the optic axis, exhibits zero birefringence, others show maximum birefringence, but most show an intermediate value. The maximum birefringence is characteristic for each mineral. Birefringence may also vary depending on the wavelength of the incident light.
Slide 49-

Wedge If our sample is wedged shaped, as shown above, instead of flat, the thickness of the sample and the corresponding retardation will vary along the length of the wedge. Examination of the wedge under crossed polars, gives an image as shown below, and reveals:
Slide 50-

POLYCHROMATIC LIGHT Polychromatic or White Light consists of light of a variety of wavelengths, with the corresponding retardation the same for all wavelengths. Due to different wavelengths, some reach the upper polar in phase and are cancelled, others are out of phase and are transmitted through the upper polar. The combination of wavelengths which pass the upper polar produces the interference colours, which are dependant on the retardation between the fast and slow rays. Examining the quartz wedge between crossed polars in polychromatic light produces a range of colours. This colour chart is referred to as the
Slide 51-

Examples
Slide 52-

Michelle Levy
Slide 53-

Thickness At the thin edge of the wedge the thickness and retardation are ~ 0, all of the wavelengths of light are cancelled at the upper polarizer resulting in a black colour. With increasing thickness, corresponding to increasing retardation, the interference colour changes from black to grey to white to yellow to red and then a repeating sequence of colours from blue to green to yellow to red. The colours get paler, more washed out with each repetition. In the above image, the repeating sequence of colours changes from red to blue at retardations of 550, 1100, and 1650 nm. These boundaries separate the colour sequence into first, second and third order colours. Above fourth order, retardation > 2200 nm, the colours are washed out and become creamy white. The interference colour produced is dependant on the wavelengths of light which pass the upper polar and the wavelengths which are cancelled.
Slide 54-

Thin section application This same technique can be used by the thin section technician when she makes a thin section. By looking at the interference colour she can judge the thickness of the thin section. The recognition of the order of the interference colour displayed by a mineral comes with practice and familiarity with various minerals. In the labs you should become familar with recognizing interference colours.
Slide 55-

INTERFERENCE AT THE UPPER POLAR Now look at the interference of the fast and slow rays after they have exited the anisotropic mineral. fast ray is ahead of the slow ray by some amount = D Interference phenomena are produced when the two rays are resolved into the vibration direction of the upper polar.
Slide 56-

Interference
Slide 57-

Light 1-Light passing through lower polar, plane polarized, encounters sample and is split into fast and slow rays. 2-If the retardation of the slow ray = 1 whole wavelength, the two waves are IN PHASE. 3-When the light reaches the upper polar, a component of each ray is resolved into the vibration direction of the upper polar. 4-Because the two rays are in phase, and at right angles to each other, the resolved components are in opposite directions and destructively interfere and cancel each other. 5-Result is no light passes the upper polar and the grain appears black.
Slide 58-

ISOTROPIC INDICATRIX To examine how light travels through a mineral, either isotropic or anisotropic, an indicatrix is used. INDICATRIX - a 3 dimensional geometric figure on which the index of refraction for the mineral and the vibration direction for light travelling through the mineral are related. Indicatrix is constructed such that the indices of refraction are plotted on lines from the origin that are parallel to the vibration directions.
Slide 59-

If retardation of the slow ray behind the fast ray = ½ a wavelength, the two rays are OUT OF PHASE, and can be resolved into the vibration direction of the upper polar. Both components are in the same direction, so the light constructively interferes and passes the upper polar.
Slide 60-

OPTICS In Isotropic Materials - the velocity of light is the same in all directions. The chemical bonds holding the material together are the same in all directions, so that light passing through the material sees the same electronic environment in all directions regardless of the direction the light takes through the material. Isotropic materials of interest include the following isometric minerals: Halite - NaCl Fluorite - Ca F2 Garnet X3Y2(SiO4)3, where: X = Mg, Mn, Fe2+, Ca Y = Al, Fe3+, Cr Periclase - MgO
Slide 61-

continue If an isometric mineral is deformed or strained then the chemical bonds holding the mineral together will be effected, some will be stretched, others will be compressed. The result is that the mineral may appear to be anisotropic.
Slide 62-

ISOTROPIC vs. ANISOTROPIC Distinguishing between the two mineral groups with the microscope can be accomplished quickly by crossing the polars, with the following being obvious: All isotropic minerals will appear dark, and stay dark on rotation of the stage. Anisotropic minerals will allow some light to pass, and thus will be generally light, unless in specific orientations. Why are isotropic materials dark? Isotropic minerals do no affect the polarization direction of the light which has passed through lower polarizer; Light which passes through the mineral is absorbed by the upper polar.
Slide 63-

continue Why do anisotropic minerals not appear dark and stay dark as the stage is rotated? Anisotropic minerals do affect the polarization of light passing through them, so some component of the light is able to pass through the upper polar. Anisotropic minerals will appear dark or extinct every 90° of rotation of the microscope stage. Any grains which are extinct will become light again, under crossed polars as the stage is rotated slightly.
Slide 64-

İsotropic and anisotropic minerals To see the difference between Isotropic vs. Anisotriopic minerals viewed with the petrographic microscope look atthe following images: - plane light view of a metamorphic rock containing three garnet grains, in a matrix of biotite, muscovite, quartz and a large stauroite grain at the top of the image. - Crossed polar view of the same image. Note that the three garnet grains are 'extinct" or black, while the remainnder of the minerals allow some light to pass.
Slide 65-

determine the index of a refraction It is possible to determine the index of a refraction for a light wave of random orientation travelling in any direction through the indicatrix. a wave normal, is constructed through the centre of the indicatrix a slice through the indicatrix perpendicular to the wave normal is taken. the wave normal for isotropic minerals is parallel to the direction of propagation of light ray. index of refraction of this light ray is the radius of this slice that is parallel to the vibration direction of the light. For isotropic minerals the indicatrix is not needed to tell that the index of refraction is the same in all directions. Indicatrix introduced to prepare for its application with anisotropic materials.
Slide 66-

EXTINCTION Anisotropic minerals go extinct between crossed polars every 90° of rotation. Extinction occurs when one vibration direction of a mineral is parallel with the lower polarizer. As a result no component of the incident light can be resolved into the vibration direction of the upper polarizer, so all the light which passes through the mineral is absorbed at the upper polarizer, and the mineral is black. Upon rotating the stage to the 45° position, a maximum component of both the slow and fast ray is available to be resolved into the vibration direction of the upper polarizer. Allowing a maximum amount of light to pass and the mineral appears brightest.
Slide 67-

continue The only change in the interference colours is that they get brighter or dimmer with rotation, the actual colours do not change. Many minerals generally form elongate grains and have an easily recognizable cleavage direction, e.g. biotite, hornblende, plagioclase. The extinction angle is the angle between the length or cleavage of a mineral and the minerals vibration directions. The extinction angles when measured on several grains of the same mineral, in the same thin section, will be variable. The angle varies because of the orientation of the grains. The maximum extinction angle recorded is diagnostic for the mineral.
Slide 68-

Types of Extinction 1-Parallel ExtinctionThe mineral grain is extinct when the cleavage or length is aligned with one of the crosshairs.The extinction angle (EA) = 0°e.g. orthopyroxene biotite 2-Inclined ExtinctionThe mineral is extinct when the cleavage is at an angle to the crosshairs.EA > 0°e.g. clinopyroxene hornblende
Slide 69-

continue 3-Symmetrical ExtinctionThe mineral grain displays two cleavages or two distinct crystal faces. It is possible to measure two extinction angles between each cleavage or face and the vibration directions. If the two angles are equal then Symmetrical extinction exists.EA1 = EA2e.g. amphibole calcite 4-No CleavageMinerals which are not elongated or do not exhibit a prominent cleavage will still go extinct every 90° of rotation, but there is no cleavage or elongation direction from which to measure the extinction angle.e.g. quartz olivine
Slide 70-

Exceptions to Normal Extinction Patterns Different portions of the same grain may go extinct at different times, i.e. they have different extinction angles. This may be caused by chemical zonation or strain. Chemical zonation The optical properties of a mineral vary with the chemical composition resulting in varying extinction directions for a mineral. Such minerals are said to be zoned.e.g. plagioclase, olivine Strain During deformation some grains become bent, resulting in different portions of the same grain having different orientations, therefore they go extinct at different times.e.g. quartz, plagioclase
Slide 71-

ACCESSORY PLATES The accessory plates allow for the determination of the FAST (low n) and SLOW (high n) rays which exit from the mineral being examined. The plates consist of pieces of quartz, gypsum or muscovite mounted in a holder so that the vibration directions of the mineral piece are parallel to the long and short axis of the holder.
Slide 72-

45 degree position Consider a mineral grain lying on the stage such that its vibration directions are in the 45° position. The light passing through the mineral is split into two rays, with the slow ray retarded behind the fast ray upon exiting the grain, retardation = D1. The accessory plate, gypsum plate, has a constant thickness and therefore a constant retardation, DA. If the accessory plate is superimposed over the mineral so that the slow ray vibration directions are parallel, then the ray that is the slow ray exiting the mineral is the slow ray in the accessory plate and it is further retarded. The result is a higher total retardation D1 + DA = D2 The two rays when they reach the upper polar result in a higher order of interference colour, the total retardation is higher and lies to the right of the original colour on the interference colour chart.
Slide 73-

90 degree position Rotating the mineral 90° results in the fast ray vibration direction of the mineral being parallel to the slow ray vibration direction of the accessory plate. The ray which was the slow ray in the mineral becomes the fast ray in the accessory plate. The result is that the accessory plate cancels some of the retardation produced by the mineral, the total retardation: D1 - DA = D3 The interference colour produced at the upper polar is a lower order colour.
Slide 74-

Accessory plates: All accessory plates used are constructed such that the slow vibration direction is across the width of the plate, the fast vibrations direction is parallel to the length. Accessory Plates are inserted into the microscope between the objective lens and the upper polar, in the 45° position. Gypsum Plate (First Order Red Plate) Become familiar with this plate, it produces ~550 nm of retardation. The interference colour in white light is a distinct magenta colour. This colour is found at the boundary between first and second order colours on Plate 1. Mica Plate Retardation of 147 nm, the interference colour is a first order white. Quartz Wedge Wedge shaped and produces a range of retardations.
Slide 75-

VIBRATION DIRECTIONS IN A MINERAL To Determine the Vibration Direction in a Mineral. Rotate the grain on the stage to extinction. In this position the vibrations directions of the grain are parallel to the crosshairs of the microscope which are themselves parallel to the polarization directions of the microscope.
Slide 76-

VIBRATION DIRECTIONS IN A MINERAL
Slide 77-

Rotate the stage 45°, clockwise The vibration direction that was parallel to the NS crosshair is now aligned NE-SW. The grain should be brightly illuminated at this point. Note the interference colour exhibited by the grain and locate this colour on Plate 1 and record its retardation.
Slide 78-

Rotate the stage 45°, clockwise
Slide 79-

Insert the Gypsum Plate The slow ray vibration direction of the plate is aligned NE-SW. Is the interference colour now exhibited by the grain higher or lower than the recorded in step 2, i.e. has the colour moved up (to the right) or down (to the left) by 550 nm.
Slide 80-

Gypsum Plate.
Slide 81-

Gypsum Plate If the colour increased, went up the chart, then the slow ray in the accessory plate is parallel to the slow ray in the mineral grain. If the colour decreased, went down the chart, then the slow ray of the accessory plate is parallel with the fast ray of the grain.
Slide 82-

SIGN OF ELONGATION In the mineral descriptions found in the text book the terms LENGTH FAST and LENGTH SLOW are encountered. Length fast means that the fast ray of the mineral vibrates parallel with the length of the elongate mineral or parallel to the singel cleavage, if present. This is also referred to as NEGATIVE ELONGATION, as the overall total retardation is less than that exhibited by the mineral prior to the accessory plate being inserted. Length slow means that the slow ray of the mineral vibrates parallel with the length of the mineral or the single cleavage, if present - POSITIVE ELONGATION, the total overall retardation is greater than that exhibited prior to the accessory plate being inserted. Only minerals which have an elongate habit exhibit a sign of elongation
Slide 83-

Relief and pleochroism Relief Minerals which display moderate to strong birefringence may display a change in relief as the stage is rotated, in plane light. This change in relief results from the two rays which exit the mineral having widely differing refractive indices - examine in Lab 2. Pleochroism With the upper polar removed, many coloured anisotropic minerals display a change in colour - this is pleochroism or diachroism. Produced because the two rays of light are absorbed differently as they pass through the coloured mineral and therefore the mineral displays different colours. Pleochroism is not related to the interference colours.
Slide 84-

RELIEF Refractometry involves the determination of the refractive index of minerals, using the immersion method. This method relys on having immersion oils of known refractive index and comparing the unknown mineral to the oil. If the indices of refraction on the oil and mineral are the same light passes through the oil-mineral boundary un-refracted and the mineral grains do not appear to stand out.
Slide 85-

unrefracted
Slide 86-

Refracted If noil <> nmineral then the light travelling though the oil-mineral boundary is refracted and the mineral grain appears to stand out.
Slide 87-

Minerals - the degree to which a mineral grain or grains appear to stand out from the mounting material, whether it is an immersion oil, Canada balsam or another mineral
Slide 88-

When examining minerals you can have: mineral stands out strongly from the mounting medium, whether the medium is oil, in grain mounts, or other minerals in thin section, for strong relief the indices of the mineral and surrounding medium differ by greater than 0.12 RI units. mineral does not strongly stand out, but is still visible, indices differ by 0.04 to 0.12 RI units. mineral does not stand out from the mounting medium, indices differ by or are within 0.04 RI units of each other.
Slide 89-

Positive or negative relief A mineral may exhibit positive or negative relief: +ve relief - index of refraction for the material is greater than the index of the oil.- e.g. garnet 1.76 -ve relief nmin < noil - e.g. fluorite 1.433 It is useful to know whether the index of the mineral is higher or lower that the oil. This will be covered in the second lab section - Becke Line and Refractive Index Determination.
Slide 90-

BECKE LINE In order to determine whether the idex of refraction of a mineral is greater than or less than the mounting material the Becke Line Method is used - a band or rim of light visible along the grain boundary in plane light when the grain mount is slightly out of focus. Becke line may lie inside or outside the mineral grain depending on how the microscope is focused.
Slide 91-

Becke line To observe the Becke line use medium or high power, close aperture diagram, for high power flip auxiliary condenser into place. Increasing the focus by lowering the stage, i.e. increase the distance between the sample and the objective, the Becke line appears to move into the material with the higher index of refraction. The Becke lines observed are interpreted to be produced as a result of the lens effect and/or internal reflection effect.
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LENS EFFECT Most mineral grains are thinner at their edges than in the middle, i.e. they have a lens shape and as such they act as a lens.
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If nmin > noil the grain acts as a converging lens, concentrating light at the centre of the grain.
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If nmin < noil, grain is a diverging lens, light concentrated in oil.
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INTERNAL REFLECTION This hypothesis to explain why Becke Lines form requires that grain edges be vertical, which in a normal thin section most grain edges are believed to be more or less vertical. With the converging light hitting the vertical grain boundary, the light is either refracted or internally reflected, depending on angles of incidence and indices of refraction. Result of refraction and internal reflection concentrates light into a thin band in the material of higher refractive index.
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If nmin > noil the band of light is concentrated within the grain.
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If nmin < noil the band of light is concentrated within the oil.
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If nmin < noil the band of light is concentrated within the oil.
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BECKE LINE MOVEMENT The direction of movement of the Becke Line is determined by lowering the stage with the Becke Line always moving into the material with the higher refractive index. The Becke Line can be considered to form from a cone of light that extends upwards from the edge of the mineral grain. Becke line can be considered to represent a cone of light propagating up from the edges of the mineral.
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If nmin < noil, the cone converges above the mineral.
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f nmin > noil, the cone diverges above the mineral.
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By changing focus the movement of the Becke line can be observed. If focus is sharp, such that the grain boundaries are clear the Becke line will coincide with the grain boundary. Increasing the distance between the sample and objective, i.e. lower stage, light at the top of the sample is in focus, the Becke line appears: in the mineral if nmin >noil or in the oil if nmin << noil
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Becke line will always move towards the material of higher RI upon lowering the stage. A series of three photographs showing a grain of orthoclase: The grain in focus, with the Becke line lying at the grain boundary. The stage is raised up, such that the grain boundary is out of focus, but the Becke line is visible inside the grain. The stage is lowered, the grain boundary is out of focus, and the Becke line is visible outside the grain. When the RI of the mineral and the RI of the mounting material are equal, the Becke line splits into two lines, a blue line and an orange line. In order to see the Becke line the microscope is slightly out of focus, the grain appears fuzzy, and the two Becke lines are visible. The blue line lies outside the grain and the orange line lies inside the grain. As the stage is raised or lowered the two lines will shift through the grain boundary to lie inside and outside the grain, respectively.
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Index of Refraction in Thin Section It is not possible to get an accurate determination of the refractive index of a mineral in thin section, but the RI can be bracket the index for an unknown mineral by comparison or the unknown mineral with a mineral whose RI is known. Comparisons can be made with: epoxy or balsam, material (glue) which holds the sample to the slide n = 1.540 Quartz nw = 1.544 ne = 1.553 Becke lines form at mineral-epoxy, mineral-mineral boundaries and are interpreted just as with grain mounts, they always move into higher RI material when the stage is lowered.